Task Progress:
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Specific Aim 1 is to develop and refine our current model to incorporate melatonin as a marker rhythm. We have incorporated an existing physiologically-based mathematical model of the diurnal variations in plasma melatonin levels into our model to predict melatonin synthesis onset (Synon) and synthesis offset (Synoff) as two markers of melatonin phase. The phase relationships between Synon, Synoff and the fit minimum of Core Body Temperature CBTmin, another accepted marker of circadian rhythms, have been determined. The revised model can predict melatonin amplitude, melatonin suppression by light and phase-shifting of melatonin rhythms at bright light levels. Our model has been tested with experimental melatonin data in which subjects were exposed to 1-pulse of continuous bright light, continuous dim light or a pattern of intermittent bright and dim light.
Specific Aim 3 is to incorporate wavelength sensitivity into our current model. We have begun to revise the light input to our model from lux to an irradiance measure (photons/cm2/sec) for both polychromatic and monochromatic light exposures. We explored the physiological basis of a two-channel photoreceptor model, in which one channel is driven by rod/cone input and the other channel is driven by a melanopsin input with peak sensitivity in the short wavelength range. We have also analyzed the effects of pupil diameter on circadian response. This model has been tested with data from a 460nm fluence response curve and will be validated on future datasets.
Specific Aim 4 is to develop Schedule Assessment and Countermeasure Design Software. Over the last year we have developed a schedule/countermeasure design prototype program that allows a user to interactively design a schedule and to automatically design a countermeasure regime. We have begun transitioning our previously developed schedule building blocks into prototype scheduling applications to build a tool that will facilitate the use of our models by NASA personnel. Used together we have shown that our methods can be used to design a variety of schedules relevant to NASA operations including shifting sleep wake (slam shifting) and non-24 hour schedules. We have also begun expanding our framework to include methods that determine the minimum amount of light required to maintain entrainment.
By request of the reviewers, we have began to explore inter-individual differences in performance. An aspect of individual difference not currently addressed in the circadian literature is to evaluate differences in the appropriate model structure. Consequently, we have begun developing methodologies for determining how optimal model structure may differ by individual. The benefit of the framework is that models are easily understandable by non-mathematicians and that the probability distributions can be approximated by existing data. Our initial results are promising and have shown that optimal model structure can vary by individual.
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Abstracts for Journals and Proceedings
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Dean DA 2nd, Klerman EB. "Optimum scheduling of countermeasures." Society for Industrial and Applied Mathematics - Society for Mathematical Biology (SIAM-SMB) Joint Session on the Life Sciences, Raleigh, NC, July 31-August 4, 2006. Society for Industrial and Applied Mathematics - Society for Mathematical Biology (SIAM-SMB) Joint Session on the Life Sciences, in press June 2006. , Jun-2006
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Abstracts for Journals and Proceedings
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Dean DA 2nd, Forger DB, Klerman EB. "Designing optimal light intervention schedules for experimental and operational settings." Associated Professional Sleep Societies 19th Annual Meeting, Denver, Colorado, June 18-23, 2005. Sleep. 2005;28A:A69. , Jun-2005
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Abstracts for Journals and Proceedings
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St Hilarie M, Gronfier C, Klerman EB. "Addition of a light effect to a physiologically-based model of melatonin." SLEEP 2006: 20th Anniversary Meeting of the Associated Professional Sleep Societies, Salt Lake City, Utah, June 17 - 22, 2006. Sleep. In Press, 2006. , Apr-2006
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Abstracts for Journals and Proceedings
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St Hilaire MA, Klerman EB, Lockley SW, Brainard GC, Kronauer RE. "Revision of a mathematical model of circadian photic resetting to incorporate spectral sensitivity." Associated Professional Sleep Societies 19th Annual Meeting, Denver, Colorado, June 18-23, 2005. Sleep. 2005;28A:A56. , Jun-2005
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Abstracts for Journals and Proceedings
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Dean DA 2nd, Barger LK, Livingston G, Klerman EB. "Understanding Bayesian network sensitivity in classifiers derived from human experimental data." Life Science Society Computational Systems Bioinformatics Conference. Stanford, CA, 2006 August. Life Science Society Computational Systems Bioinformatics Conference. Submitted for Publication, 2006 August. , Aug-2006
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Abstracts for Journals and Proceedings
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Dean DA 2nd, Barger LK, Livingston G, Klerman EB. "Using Bayesian Networks to understand individual differences that affect the use of actigraphy as a predictor of sleep." SLEEP 2006: 20th Anniversary Meeting of the Associated Professional Sleep Societies, Salt Lake City, Utah, June 17 - 22, 2006. Sleep. In Press, 2006. , Apr-2006
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Abstracts for Journals and Proceedings
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Dean DA 2nd, Klerman EB. "Using domain specific information to design optimal circadian adjustment schedules." 35th International Congress of Physiological Sciences, March 2005. 35th International Congress of Physiological Sciences, 2005. , Mar-2005
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Abstracts for Journals and Proceedings
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Klerman EB, Dean DA 2nd, Gurdziel K, St Hilaire M, Kronauer RE. "Mathematical modeling of human circadian physiology applications in space and for the general public." 15th International Academy of Astronautics Humans in Space Symposium, Graz, Austria, 2005 May. 15th International Academy of Astronautics Humans in Space Symposium, 2005 May. , May-2005
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Abstracts for Journals and Proceedings
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Klerman EB, Dean DA 2nd, Gurdziel K, St Hilaire M, Kronauer RE. "Mathematical modeling of human circadian physiology." Habitation 2006 Conference, Orlando, FL, 2006 February. Habitation 2006;10(3-4):197-8. , Feb-2006
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Abstracts for Journals and Proceedings
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St Hilarie M, Klerman EB. "A tool to analyze melatonin phase and amplitude using a physiologically based model of melatonin." SLEEP 2006: 20th Anniversary Meeting of the Associated Professional Sleep Societies, Salt Lake City, Utah, June 17 - 22, 2006. Sleep. In Press, 2006. , Apr-2006
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Abstracts for Journals and Proceedings
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Thompson P, Klerman EB, Dean DA 2nd. "Identifying two-process performance models using limited data." Society for Industrial and Applied Mathematics - Society for Mathematical Biology (SIAM-SMB) Joint Session on the Life Sciences, Raleigh, NC, July 31-August 4, 2006. Society for Industrial and Applied Mathematics - Society for Mathematical Biology (SIAM-SMB) Joint Session on the Life Sciences. In Press, June 2006. , Jun-2006
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Articles in Peer-reviewed Journals
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Indic P, Gurdziel K, Kronauer RE, Klerman EB. "Development of a two-dimension manifold to represent high dimension mathematical models of the intracellular Mammalian circadian clock." J Biol Rhythms. 2006 Jun;21(3):222-32. PMID: 16731662 , Jun-2006
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Articles in Peer-reviewed Journals
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Klerman EB. "Clinical aspects of human circadian rhythms." J Biol Rhythms. 2005 Aug;20(4):375-86. Review. PMID: 16077156 , Aug-2005
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Awards
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Dean DA 2nd. "Mr. Dean (graduate student) received Travel Sponsorship to attend Case Studies in Bayesian Statistics 8, a nationally recognized conference that reviews applications of Bayesian statistics, September 2005." Sep-2005
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Awards
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Dean DA 2nd. "Mr. Dean (graduate student) designated a Partners Healthcare scholar and awarded an Association of Multi-cultural Members at Partners Educational Scholarship, 2005." May-2005
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